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<title>WICE - Web-based Interactive Computational Environment</title>
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    <div id="head">
        <div id="site">
            <h1><a href="/" title="Web-based Interactive Computational Environment Homepage">
                WICE
            </a></h1>
            <p>Web-based Interactive Computational Environment</p>
        </div>
        <div id="nav">
            <ul>
                <li id="nav-about" class="extra"><a href="/about" title="About The WICE Project"
                    >About</a></li>
                <li id="nav-help" class="extra"><a href="/help" title="A Quick Tutorial on the uce of WICE"
                    >Help</a></li>
                <li id="nav-hydrodynamics" class="programs">
                    <a href="hydrodynamics.html" title="Use Hydrodynamics Tool Chain"
                        ><strong>Hydro- dynamics</strong></a>
                    <ul>
                        <li id="nav-msroll" class="tool"><a href="msroll.html" title="Setup and run the MSROLL utility"
                            ><strong>MSROLL</strong>
                            <span class="summary">
                                Generate a 3D mesh from an x-ray crystallography experiment
                            </span></a>
                        </li>
                        <li id="nav-rcoal" class="tool"><a href="rcoal.html" title="Setup and run the RCOAL utility"
                            ><strong>RCOAL</strong>
                            <span class="summary">
                                Optimize a 3D MSROLL mesh by reducing the number of triangles
                            </span></a>
                        </li>
                        <li id="nav-best" class="tool"><a href="best.html" title="Setup and run the BEST utility"
                            ><strong>BEST</strong>
                            <span class="summary">
                                Calculate the hydrodynamic transport tensors from the 3D structure of a molecule
                            </span></a>
                        </li>
                    </ul>
                </li>
                <li id="nav-moleculardynamics" class="programs">
                    <a href="molecular-dynamics.html" title="Run the molecular dynamics toolchain"
                        ><strong>Molecular Dynamics</strong>
                    </a>
                </li>
            </ul>
        </div>
    </div>
    <div id="status">
        <div id="user">
            <span class="working-project">Current Project:
                <a href="/user/projects/current" title="View your current working project" class="project"
                >Example</a>
            </span>
            <a href="/user" title="Your user account" class="username"
                >teague</a>
            <ul>
                <li><a href="/user/account" title="Administer your user account"
                    >Account</a></li>
                <li><a href="/user/projects" title="View your current projects"
                    >Projects</a></li>
                <li><a href="/user/results" title="View your previous results"
                    >Results</a></li>
                <li><a href="/user/sign-out" title="Administer your user account"
                    >Sign Out</a></li>
            </ul>
        </div>
        <div id="system">
            <a href="/status" title="View a summary of the server's status">
                <span class="medium status">Moderate Usage</span>
            </a>
        </div>
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    <div id="main">
        <div id="about">
            <h1>
                <span>Web-based</span>
                <span>Interactive</span>
                <span>Computational</span>
                <span>Environment</span>
            </h1>
            <p>
                WICE provides researchers with an easy-to-use interface 
                for running complex, resource-intensive computational 
                tool-chains for hydrodynamic and Molecular Dynamics
                experiments as well as facilities for organizing, storing,
                and sharing results.
            </p>
            <ul id="tools-overview">
                <li>
                    <h3>
                        <a href="/help/hydrodynamics" title="More about Hydrodynamics">Hydrodynamics</a>
                    </h3>
                    <p>
                        Build and refine 3D meshes from x-ray 
                        crystallography-derived PDB file to calculate
                        calculate the hydrodynamic transport tensors of 
                        rigid molecules with stick boundary conditions.
                        Converts an  into a 3D mesh for future calculations.
                    </p>
                    <p>Tools in this chain: MSROLL, RCOAL, BEST</p>
                </li>
                <li>
                    <h3>
                        <a href="/help/molecular-dynamics" title="More about Molecular Dynamics">Molecular Dynamics</a>
                    </h3>
                    <p>
                        Build and refine 3D meshes from x-ray 
                        crystallography-derived PDB file to calculate
                        calculate the hydrodynamic transport tensors of 
                        rigid molecules with stick boundary conditions.
                        Converts an  into a 3D mesh for future calculations.
                    </p>
                    <p>Tools in this chain: MSROLL, RCOAL, BEST</p>
                </li>
            </ul>
            <p>
                The WICE system is flexible and can be applied to many
                similar computation chains. If you are interested in
                using it in your own systems, please contact <a href="#">
                the developers</a> for more information.
            </p>
        </div>
        <div id="recent-activity">
            <h1>Your Activity</h1>
            <h2>Current Project: <a href="#" title="View the example project">example</a></h2>
            <h2>Recent Tool Executions:</h2>
            <table class="job list">
                <thead>
                    <tr>
                        <th class="tool">Tool</th>
                        <th class="job">Job</th>
                        <th class="date">Date</th>
                    </tr>
                </thead>
                <tbody>
                    <tr>
                        <td class="tool"><a href="msroll-result.html" title="View the results of this job"
                            >BEST</a></td>
                        <td class="job"><a href="msroll-result.html" title="View the results of this job"
                            >1ubq201</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the results of this job"
                            >Apr. 3, 2011</a></td>
                    </tr>
                    <tr>
                        <td class="tool"><a href="msroll-result.html" title="View the results of this job"
                            >RCOAL</a></td>
                        <td class="job"><a href="msroll-result.html" title="View the results of this job"
                            >1ubq201</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the results of this job"
                            >Apr. 3, 2011</a></td>
                    </tr>
                    <tr>
                        <td class="tool"><a href="msroll-result.html" title="View the results of this job"
                            >RCOAL</a></td>
                        <td class="job"><a href="msroll-result.html" title="View the results of this job"
                            >1ubq201</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the results of this job"
                            >Apr. 3, 2011</a></td>
                    </tr>
                    <tr>
                        <td class="tool"><a href="msroll-result.html" title="View the results of this job"
                            >MSROLL</a></td>
                        <td class="job"><a href="msroll-result.html" title="View the results of this job"
                            >1ubq201</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the results of this job"
                            >Apr. 2, 2011</a></td>
                    </tr>
                    <tr>
                        <td class="tool"><a href="msroll-result.html" title="View the results of this job"
                            >RCOAL</a></td>
                        <td class="job"><a href="msroll-result.html" title="View the results of this job"
                            >1ubq</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the results of this job"
                            >Apr. 1, 2011</a></td>
                    </tr>
                    <tr>
                        <td class="tool"><a href="msroll-result.html" title="View the results of this job"
                            >RCOAL</a></td>
                        <td class="job"><a href="msroll-result.html" title="View the results of this job"
                            >1ubq</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the results of this job"
                            >Apr. 1, 2011</a></td>
                    </tr>
                    <tr>
                        <td class="tool"><a href="msroll-result.html" title="View the results of this job"
                            >MSROLL</a></td>
                        <td class="job"><a href="msroll-result.html" title="View the results of this job"
                            >1ubq</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the results of this job"
                            >Mar. 31, 2011</a></td>
                    </tr>
                    <tr>
                        <td class="tool"><a href="msroll-result.html" title="View the results of this job"
                            >BEST</a></td>
                        <td class="job"><a href="msroll-result.html" title="View the results of this job"
                            >1a04</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the results of this job"
                            >Mar. 20, 2011</a></td>
                    </tr>
                </tbody>
            </table>
            <h2>Your Projects:</h2>
            <table class="project list">
                <thead>
                    <tr>
                        <th class="name">Name</th>
                        <th class="date">Last Activity</th>
                    </tr>
                </thead>
                <tbody>
                    <tr>
                        <td class="name"><a href="msroll-result.html" title="View the example project"
                            >example</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the results of this job"
                            >Apr. 3, 2011</a></td>
                    </tr>
                    <tr>
                        <td class="name"><a href="msroll-result.html" title="View the example project"
                            >test project</a></td>
                        <td class="date"><a href="msroll-result.html" title="View the example project"
                            >Feb. 21, 2011</a></td>
                    </tr>
                </tbody>
            </table>
        </div>
    </div>
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